- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 4 x GLN: GLUTAMINE(Non-covalent)
- 4 x Q2N: 2-(4-fluorophenyl)-~{N}-(4-pyridin-2-yl-1,3-thiazol-2-yl)ethanamide(Non-covalent)
Q2N.2: 16 residues within 4Å:- Chain A: L.22, G.23, L.26, T.27, H.81, R.223, T.250, P.251, D.252, A.253, I.256, I.259, L.318, E.322, R.325
- Chain C: P.194
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:T.250, A:I.259, A:L.318
- Hydrogen bonds: A:A.253
- pi-Cation interactions: A:R.223
Q2N.7: 16 residues within 4Å:- Chain B: L.22, G.23, L.26, T.27, H.81, R.223, T.250, P.251, D.252, A.253, I.256, I.259, L.318, E.322, R.325
- Chain D: P.194
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:T.250, B:I.259, B:L.318
- Hydrogen bonds: B:A.253
- pi-Cation interactions: B:R.223
Q2N.13: 17 residues within 4Å:- Chain A: P.194
- Chain C: L.22, G.23, L.26, T.27, H.81, R.223, T.250, P.251, D.252, A.253, S.255, I.256, I.259, L.318, E.322, R.325
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:T.250, C:I.259, C:L.318
- Hydrogen bonds: C:A.253
- pi-Cation interactions: C:R.223
Q2N.16: 17 residues within 4Å:- Chain B: P.194
- Chain D: L.22, G.23, L.26, T.27, H.81, R.223, T.250, P.251, D.252, A.253, S.255, I.256, I.259, L.318, E.322, R.325
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:T.250, D:I.259, D:L.318
- Hydrogen bonds: D:A.253
- pi-Cation interactions: D:R.223
- 4 x MG: MAGNESIUM ION(Non-functional Binders)
MG.3: 2 residues within 4Å:- Chain C: K.199
- Ligands: UTP.12
No protein-ligand interaction detected (PLIP)MG.5: 2 residues within 4Å:- Chain A: K.199
- Ligands: UTP.4
No protein-ligand interaction detected (PLIP)MG.8: 2 residues within 4Å:- Chain D: K.199
- Ligands: UTP.15
No protein-ligand interaction detected (PLIP)MG.10: 2 residues within 4Å:- Chain B: K.199
- Ligands: UTP.9
No protein-ligand interaction detected (PLIP)- 4 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
UTP.4: 19 residues within 4Å:- Chain A: L.198, K.199, T.200, K.201, Q.204, K.235, M.239
- Chain C: S.20, K.46, D.48, P.49, Y.50, G.154, G.155, D.159, E.161
- Chain D: T.118, Q.120
- Ligands: MG.5
12 PLIP interactions:4 interactions with chain C, 8 interactions with chain A- Hydrogen bonds: C:S.20, C:K.46, C:G.155, C:E.161, A:T.200, A:T.200, A:T.200, A:K.201
- Salt bridges: A:K.199, A:K.201, A:K.201, A:K.235
UTP.9: 19 residues within 4Å:- Chain B: L.198, K.199, T.200, K.201, Q.204, K.235, M.239
- Chain C: T.118, Q.120
- Chain D: S.20, K.46, D.48, P.49, Y.50, G.154, G.155, D.159, E.161
- Ligands: MG.10
12 PLIP interactions:7 interactions with chain B, 5 interactions with chain D- Hydrogen bonds: B:T.200, B:T.200, B:K.201, D:S.20, D:S.20, D:K.46, D:G.155, D:E.161
- Salt bridges: B:K.199, B:K.201, B:K.201, B:K.235
UTP.12: 19 residues within 4Å:- Chain A: S.20, K.46, D.48, P.49, Y.50, G.154, G.155, D.159, E.161
- Chain B: T.118, Q.120
- Chain C: L.198, K.199, T.200, K.201, Q.204, K.235, M.239
- Ligands: MG.3
12 PLIP interactions:7 interactions with chain C, 5 interactions with chain A- Hydrogen bonds: C:T.200, C:T.200, C:K.201, A:S.20, A:S.20, A:K.46, A:G.155, A:E.161
- Salt bridges: C:K.199, C:K.201, C:K.201, C:K.235
UTP.15: 19 residues within 4Å:- Chain A: T.118, Q.120
- Chain B: S.20, K.46, D.48, P.49, Y.50, G.154, G.155, D.159, E.161
- Chain D: L.198, K.199, T.200, K.201, Q.204, K.235, M.239
- Ligands: MG.8
12 PLIP interactions:8 interactions with chain D, 4 interactions with chain B- Hydrogen bonds: D:T.200, D:T.200, D:T.200, D:K.201, B:S.20, B:K.46, B:G.155, B:E.161
- Salt bridges: D:K.199, D:K.201, D:K.201, D:K.235
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lynch, E.M. et al., M. tuberculosis CTP synthase filament bound to substrates. To Be Published
- Release Date
- 2025-07-02
- Peptides
- CTP synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 4 x GLN: GLUTAMINE(Non-covalent)
- 4 x Q2N: 2-(4-fluorophenyl)-~{N}-(4-pyridin-2-yl-1,3-thiazol-2-yl)ethanamide(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-functional Binders)
- 4 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lynch, E.M. et al., M. tuberculosis CTP synthase filament bound to substrates. To Be Published
- Release Date
- 2025-07-02
- Peptides
- CTP synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D