SMTL ID : 8v0d.1

Ubch5B-RING3 of MIB1 fusion structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

5 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.194, C.197, R.200, C.213, C.216 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.194, A:C.197, A:C.213, A:C.216 ZN.2: 4 residues within 4Å: Chain A: C.208, H.210, C.223, C.226 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.208, A:H.210, A:C.223, A:C.226 ZN.3: 4 residues within 4Å: Chain B: C.194, C.197, C.213, C.216 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.194, B:C.197, B:C.213, B:C.216 ZN.4: 4 residues within 4Å: Chain B: C.208, H.210, C.223, C.226 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.208, B:H.210, B:C.223, B:C.226 ZN.5: 2 residues within 4Å: Chain B: H.33, H.56 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.33, B:H.56, B:H.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, R. et al., Structural requirements for activity of Mind bomb1 in Notch signaling. Structure (2024)

Release Date

2024-11-27

Peptides

Ubch5B-RING3 of MIB1 fusion protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Ubch5B-RING3 of MIB1 fusion protein