SMTL ID : 8v1q.1

Herpes simplex virus 1 polymerase holoenzyme bound to DNA in both open/closed conformations

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.332, I.333 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.332 MG.2: 6 residues within 4Å: Chain A: F.331, D.332, G.428, Y.429, I.431, D.435 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:Y.429

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shankar, S. et al., Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance. Cell (2024)

Release Date

2024-09-04

Peptides

DNA polymerase: A
DNA polymerase processivity factor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA polymerase

DNA polymerase processivity factor

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