SMTL ID : 8v2b.1

Cryo-EM structure of mouse type II OSM receptor complex: model for full extracellular assembly

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

11 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain B: I.60, N.61, T.63, T.64 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 6 residues within 4Å: Chain B: R.528, N.529, H.545, Y.571, T.572, G.575 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 2 residues within 4Å: Chain B: N.21, T.70 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 1 residues within 4Å: Chain B: N.109 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 2 residues within 4Å: Chain B: N.39, S.41 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 4 residues within 4Å: Chain C: L.50, N.51, S.53, N.54 No protein-ligand interaction detected (PLIP) NAG-NAG.7: 3 residues within 4Å: Chain C: G.137, N.139, N.177 No protein-ligand interaction detected (PLIP) NAG-NAG.8: 3 residues within 4Å: Chain C: F.246, N.248, V.261 No protein-ligand interaction detected (PLIP) NAG-NAG.9: 4 residues within 4Å: Chain C: S.254, N.281, T.283, N.296 No protein-ligand interaction detected (PLIP) NAG-NAG.10: 4 residues within 4Å: Chain C: E.278, N.300, T.302, H.303 No protein-ligand interaction detected (PLIP) NAG-NAG.11: 5 residues within 4Å: Chain C: K.316, I.318, N.324, N.362, L.364 No protein-ligand interaction detected (PLIP)

7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.12: 1 residues within 4Å: Chain B: N.203 No protein-ligand interaction detected (PLIP) NAG.13: 2 residues within 4Å: Chain B: E.133, N.135 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.151 NAG.14: 2 residues within 4Å: Chain B: Y.320, N.366 No protein-ligand interaction detected (PLIP) NAG.15: 4 residues within 4Å: Chain C: N.26, Y.61, R.72, N.74 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:R.72, C:N.74 NAG.16: 1 residues within 4Å: Chain C: N.107 No protein-ligand interaction detected (PLIP) NAG.17: 2 residues within 4Å: Chain C: N.216, E.232 No protein-ligand interaction detected (PLIP) NAG.18: 2 residues within 4Å: Chain C: Q.341, N.354 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, Y. et al., Structures of complete extracellular assemblies of type I and type II Oncostatin M receptor complexes. Nat Commun (2024)

Release Date

2024-11-20

Peptides

Oncostatin-M: A
Interleukin-6 receptor subunit beta: B
Oncostatin-M-specific receptor subunit beta: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Oncostatin-M

Interleukin-6 receptor subunit beta

Oncostatin-M-specific receptor subunit beta

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