SMTL ID : 8v4x.1 (3 other biounits)

Structure of MALT1 in complex with an allosteric inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

homo-dimer

Ligands

2 x PHQ- VAL- ARG- PRO- ARG- CF0: Inhibitor peptide(Non-covalent)

PHQ-VAL-ARG-PRO-ARG-CF0.1: 21 residues within 4Å: Chain A: K.26, L.27, A.29, P.30, D.33, A.81, G.82, H.83, G.84, D.130, C.132, E.165, A.166, F.167, E.168, I.169, Q.170, H.171, S.172, L.209, K.213 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:L.27, A:E.165, A:A.166, A:F.167, A:F.167, A:E.168, A:I.169, A:Q.170, A:L.209 Hydrogen bonds: A:H.83, A:G.84, A:D.130, A:C.132, A:A.166, A:E.168, A:E.168, A:Q.170, A:Q.170, A:H.171, A:H.171 Salt bridges: A:D.33, A:D.130, A:E.168 PHQ-VAL-ARG-PRO-ARG-CF0.2: 20 residues within 4Å: Chain B: L.27, A.29, P.30, D.33, A.81, G.82, H.83, G.84, D.130, C.132, E.165, A.166, F.167, E.168, I.169, Q.170, H.171, G.177, L.209, K.213 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:L.27, B:F.167, B:F.167, B:E.168, B:I.169, B:Q.170, B:H.171, B:L.209, B:L.209 Hydrogen bonds: B:G.82, B:G.84, B:D.130, B:C.132, B:A.166, B:E.168, B:E.168, B:Q.170, B:Q.170, B:G.177 Water bridges: B:E.168 Salt bridges: B:D.33, B:D.130, B:E.168

2 x 01: N-{7-[(1S)-1-methoxyethyl]-2-methyl[1,3]thiazolo[5,4-b]pyridin-6-yl}-N'-[6-(2H-1,2,3-triazol-2-yl)-5-(trifluoromethyl)pyridin-3-yl]urea

01.3: 21 residues within 4Å: Chain A: V.12, A.13, L.14, K.47, V.49, L.51, L.54, Y.57, E.58, N.61, A.62, E.65, F.66, L.69, Q.247, W.248, A.251, Q.344, I.380, L.383, M.385 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.12, A:K.47, A:A.62, A:L.69, A:W.248, A:A.251 Hydrogen bonds: A:N.61, A:E.65, A:E.65, A:E.65 Water bridges: A:M.385 01.4: 19 residues within 4Å: Chain B: V.12, A.13, L.14, K.47, V.49, L.51, L.54, E.58, N.61, A.62, E.65, F.66, L.69, Q.247, W.248, A.251, Q.344, I.380, L.383 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:V.12, B:K.47, B:V.49, B:A.62, B:L.69, B:W.248, B:A.251, B:I.380, B:L.383 Hydrogen bonds: B:N.61, B:E.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Plotnik, J.P. et al., Inhibition of MALT1 and BCL2 Induces Synergistic Antitumor Activity in Models of B-Cell Lymphoma. Mol.Cancer Ther. (2024)

Release Date

2024-05-01

Peptides

Mucosa-associated lymphoid tissue lymphoma translocation protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Mucosa-associated lymphoid tissue lymphoma translocation protein 1

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