SMTL ID : 8v9q.1

Crystal structure of mGalNAc-T1 in complex with the mucin glycopeptide Muc5AC-13, Mn2+, and UDP.

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.29 Å
Oligo State
hetero-2-3-mer
Ligands
1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
2 x GOL: GLYCEROL(Non-functional Binders)
1 x SIN: SUCCINIC ACID(Non-covalent)
5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x MN: MANGANESE (II) ION(Non-covalent)
3 x A2G: 2-acetamido-2-deoxy-alpha-D-galactopyranose(Post Translational Modification)(Non-covalent)
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Collette, A.M. et al., An unusual dual sugar-binding lectin domain controls the substrate specificity of a mucin-type O-glycosyltransferase. Sci Adv (2024)
Release Date
2024-03-13
Peptides
Polypeptide N-acetylgalactosaminyltransferase 1 soluble form: AC
Mucin-5AC: BDE
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
B
B
D
D
F
E
H

Polypeptide N-acetylgalactosaminyltransferase 1 soluble form

Mucin-5AC

Related Entries With Identical Sequence

8ui6.1 | 8ujf.1