SMTL ID : 8vcd.1

Crystal Structure of plant Carboxylesterase 15 bound to SL intermediate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 13 residues within 4Å: Chain A: F.203, F.204, G.205, G.206, R.209, E.213, L.223, L.226, D.227, W.230, R.240, L.273, R.276 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.206, A:D.227, A:D.227, A:R.276, A:R.276 GOL.2: 2 residues within 4Å: Chain A: D.33, L.34 No protein-ligand interaction detected (PLIP)

1 x VTY: (5S)-5-hydroxy-3-methylfuran-2(5H)-one(Covalent)

VTY.3: 12 residues within 4Å: Chain A: G.84, G.85, G.86, D.168, S.169, S.170, F.203, L.221, L.226, F.229, L.273, H.302 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.85, A:G.86, A:S.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Palayam, M. et al., Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation. Nat Commun (2024)

Release Date

2024-08-07

Peptides

Carboxylesterase 15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carboxylesterase 15

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