SMTL ID : 8vfr.1

The crystal structure of 4-methylbenzoic acid-bound GALQE CYP199A4 after soaking in 10 mM H2O2 for 5 minutes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 29 residues within 4Å: Chain A: L.69, I.98, L.99, H.106, R.110, L.113, L.117, F.161, L.246, G.249, A.250, E.253, T.254, V.296, F.299, R.301, L.324, G.351, F.352, G.353, V.356, H.357, C.359, V.360, G.361, V.364, A.365 Ligands: 4MA.2, E5X.3 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:I.98, A:L.99, A:L.113, A:L.117, A:F.161, A:L.246, A:A.250, A:E.253, A:V.296, A:F.299, A:L.324, A:F.352, A:V.360, A:V.364 Hydrogen bonds: A:H.357 Salt bridges: A:H.106, A:R.110, A:R.301, A:H.357, A:H.357 Metal complexes: A:C.359

1 x 4MA: 4-METHYLBENZOIC ACID(Non-covalent)

4MA.2: 12 residues within 4Å: Chain A: R.93, S.96, I.98, L.99, F.183, S.245, S.248, G.249, E.253, F.299 Ligands: HEM.1, E5X.3 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.99, A:L.99, A:L.99, A:F.299 Hydrogen bonds: A:S.96, A:S.248, A:S.248 Salt bridges: A:R.93

1 x E5X: 4-(hydroxymethyl)benzoic acid(Non-covalent)

E5X.3: 12 residues within 4Å: Chain A: R.93, S.96, I.98, L.99, F.183, S.245, S.248, G.249, E.253, F.299 Ligands: HEM.1, 4MA.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.99, A:L.99, A:L.99, A:F.183 Hydrogen bonds: A:S.96, A:L.99, A:S.248, A:S.248 Salt bridges: A:R.93

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: Y.178, Q.204, N.208 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Podgorski, M.N. et al., Engineering Peroxygenase Activity into Cytochrome P450 Monooxygenases through Modification of the Oxygen Binding Region. Acs Catalysis (2024)

Release Date

2024-05-08

Peptides

Cytochrome P450: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450

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