SMTL ID : 8vg8.1

Crystal Structure of T115A Variant of D-Dopachrome Tautomerase (D-DT) Bound to 4CPPC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

homo-trimer

Ligands

3 x 7L9: 4-(3-carboxyphenyl)pyridine-2,5-dicarboxylic acid(Non-covalent)

7L9.1: 9 residues within 4Å: Chain A: P.1, K.32, R.36, S.63, I.64, S.104, I.107, K.109, M.114 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.64, A:I.107 Hydrogen bonds: A:P.1, A:P.1, A:I.64 Water bridges: A:N.38, A:S.104 Salt bridges: A:K.32, A:R.36, A:K.109 7L9.2: 9 residues within 4Å: Chain B: P.1, K.32, R.36, S.63, I.64, S.104, I.107, K.109, M.114 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.64, B:I.107 Hydrogen bonds: B:P.1, B:P.1, B:I.64 Water bridges: B:N.38, B:S.104 Salt bridges: B:K.32, B:R.36, B:K.109 7L9.3: 9 residues within 4Å: Chain C: P.1, K.32, R.36, S.63, I.64, S.104, I.107, K.109, M.114 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:I.64, C:I.107 Hydrogen bonds: C:P.1, C:P.1, C:I.64 Water bridges: C:N.38, C:S.104 Salt bridges: C:K.32, C:R.36, C:K.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parkins, A. et al., The C-terminal Region of D-DT Regulates Molecular Recognition for Protein-Ligand Complexes. J.Med.Chem. (2024)

Release Date

2024-05-01

Peptides

D-dopachrome decarboxylase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D-dopachrome decarboxylase

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