SMTL ID : 8vif.1

SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain C: F.356, F.360, N.361, L.386 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:F.360, C:L.386

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Voss, W.N. et al., Hybrid immunity to SARS-CoV-2 arises from serological recall of IgG antibodies distinctly imprinted by infection or vaccination. Cell Rep Med (2024)

Release Date

2024-07-24

Peptides

SC27 Fab heavy chain: A
SC27 Fab light chain: B
Spike glycoprotein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
R

SC27 Fab heavy chain

SC27 Fab light chain

Spike glycoprotein

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