SMTL ID : 8vm1.1

Structural Elucidation of the Mesothelin Mucin16 CA125 Interaction

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG.1: 7 residues within 4Å: Chain A: T.74, N.76, T.126, K.138, D.140, I.142, Y.184 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.142

1 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN.2: 3 residues within 4Å: Chain A: G.92, R.94, N.97 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rupert, P.B. et al., Structural elucidation of the mesothelin-mucin-16/CA125 interaction. Structure (2024)

Release Date

2024-09-04

Peptides

Mesothelin, cleaved form,Mucin-16: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mesothelin, cleaved form,Mucin-16