SMTL ID : 8vnn.1

Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 480s

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.79 Å
Oligo State
homo-dimer
Ligands
2 x DG- DA- DG- DA- DG- DT- DC- DA: DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3')(Non-covalent)
5 x GOL: GLYCEROL(Non-functional Binders)
2 x MN: MANGANESE (II) ION(Non-covalent)
2 x NA: SODIUM ION(Non-functional Binders)
4 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Chang, C. et al., Observing one-divalent-metal-ion-dependent and histidine-promoted His-Me family I-PpoI nuclease catalysis in crystallo. Elife (2024)
Release Date
2024-07-10
Peptides
Intron-encoded endonuclease I-PpoI: CD
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
C
A
D
B

Intron-encoded endonuclease I-PpoI

Toggle Identical (CD)

Related Entries With Identical Sequence

1cz0.1 | 1evx.1 | 8vmo.1 | 8vmp.1 | 8vmq.1 | 8vmr.1 | 8vms.1 | 8vmt.1 | 8vmu.1 | 8vmv.1 | 8vmw.1 | 8vmx.1 | 8vmy.1 | 8vmz.1 | 8vn0.1 | 8vn1.1 | 8vn2.1 | 8vn3.1 | 8vn4.1 | 8vn5.1 | 8vn6.1 | 8vn7.1 | 8vn8.1 | 8vn9.1 | 8vna.1 | 8vnb.1 | 8vnc.1 | 8vnd.1 | 8vne.1 | 8vnf.1  more...