SMTL ID : 8w00.1 (1 other biounit)

Q108K:K40L:T51V:T53S:Y19W:R58W:L117E mutant of hCRBPII bound to synthetic fluorophore TD-1V

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

monomer

Ligands

1 x 01: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal

01.1: 13 residues within 4Å: Chain A: F.16, W.19, L.40, S.53, W.58, Y.60, S.76, L.77, W.106, K.108, E.117, L.119 Ligands: ACT.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.16, A:W.19, A:L.40, A:W.58, A:Y.60, A:W.106, A:K.108, A:L.119, A:L.119 pi-Stacking: A:W.58

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: Y.60, V.62, E.72, C.95, Q.97, W.106 Ligands: 01.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.62 Hydrogen bonds: A:Y.60, A:Q.97, A:W.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santos, E.M. et al., Regulation of Emission via a Protein-Bound Fluorophore. To Be Published

Release Date

2024-04-03

Peptides

Retinol-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Retinol-binding protein 2

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