SMTL ID : 8w0s.1

Human EBP complexed with compound 3a

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x 01: 1-methyl-8-[(oxan-4-yl)methyl]-3-[4-(trifluoromethyl)phenyl]-1,3,8-triazaspiro[4.5]decane-2,4-dione

01.1: 12 residues within 4Å: Chain A: L.43, T.47, I.83, E.88, L.108, W.109, Y.112, M.129, D.170, M.200, N.201, W.204 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.43, A:I.83, A:Y.112, A:W.204 Hydrogen bonds: A:D.170 Salt bridges: A:E.88 pi-Cation interactions: A:W.204 Halogen bonds: A:T.47 01.2: 12 residues within 4Å: Chain B: L.43, T.47, I.83, E.88, L.108, W.109, Y.112, M.129, D.170, M.200, N.201, W.204 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.43, B:I.83, B:Y.112, B:W.204 Hydrogen bonds: B:D.170 Salt bridges: B:E.88 pi-Cation interactions: B:W.204 Halogen bonds: B:T.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dorel, R. et al., Discovery and Optimization of Selective Brain-Penetrant EBP Inhibitors that Enhance Oligodendrocyte Formation. J.Med.Chem. (2024)

Release Date

2024-06-19

Peptides

3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

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