SMTL ID : 8w2d.1 (1 other biounit)

holo-PCP-Thioesterase di-domain structure from the sulfazecin biosynthetic nonribosomal peptide synthetase, SulM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x PNS: 4'-PHOSPHOPANTETHEINE(Covalent)

PNS.1: 19 residues within 4Å: Chain A: S.49, F.50, I.53, N.110, A.111, A.112, G.113, V.116, N.117, A.179, N.180, F.227, L.228, S.233, F.245, F.249, L.289, H.317, Y.318 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.50, A:F.50, A:L.228, A:F.245 Hydrogen bonds: A:N.110, A:N.110, A:N.117, A:S.233 Water bridges: A:Y.69

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: F.43, Y.69, P.72, R.123 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.69, A:R.123, A:R.123 EDO.3: 3 residues within 4Å: Chain A: A.57, K.58, F.244 No protein-ligand interaction detected (PLIP) EDO.4: 3 residues within 4Å: Chain A: D.120, R.123, A.124 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, K.D. et al., The structure of the monobactam-producing thioesterase domain of SulM forms a unique complex with the upstream carrier protein domain. J.Biol.Chem. (2024)

Release Date

2024-08-07

Peptides

Non-ribosomal peptide synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-ribosomal peptide synthetase

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