SMTL ID : 8w2x.1 (1 other biounit)

TAS-120 covalent structure with FGFR2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

monomer

Ligands

1 x 01: 1-[(3S)-3-{4-amino-3-[(3,5-dimethoxyphenyl)ethynyl]-1H-pyrazolo[3,4-d]pyrimidin-1-yl}pyrrolidin-1-yl]propan-1-one

01.1: 18 residues within 4Å: Chain A: L.43, G.46, C.47, V.51, A.71, K.73, E.90, M.94, I.104, V.118, V.120, E.121, Y.122, A.123, L.189, A.199, D.200, F.201 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.51, A:V.51, A:I.104, A:V.120, A:A.199 Hydrogen bonds: A:E.121, A:A.123, A:D.200

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 1 residues within 4Å: Chain A: Q.308 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.308

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: R.136, E.141 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.141 Salt bridges: A:R.136 SO4.4: 5 residues within 4Å: Chain A: R.186, T.216, T.217, N.218, R.220 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.217, A:N.218, A:N.218, A:R.220 Salt bridges: A:R.186 SO4.5: 5 residues within 4Å: Chain A: K.29, W.30, K.61, K.99, L.107 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.107 Salt bridges: A:K.29, A:K.61, A:K.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goyal, L. et al., A Model for Decoding Resistance in Precision Oncology: Acquired Resistance to FGFR inhibitors in Cholangiocarcinoma. Ann Oncol (2024)

Release Date

2025-01-01

Peptides

Fibroblast growth factor receptor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fibroblast growth factor receptor 2

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