SMTL ID : 8w5a.1

Crystal structure of the RING domain of human XIAP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.32, H.34, C.48, C.51 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.32, A:H.34, A:C.48, A:C.51 ZN.2: 4 residues within 4Å: Chain A: C.17, C.20, C.38, C.41 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.17, A:C.20, A:C.38, A:C.41 ZN.4: 4 residues within 4Å: Chain B: C.17, C.20, C.38, C.41 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.17, B:C.20, B:C.38, B:C.41 ZN.5: 4 residues within 4Å: Chain B: C.32, H.34, C.48, C.51 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.32, B:H.34, B:C.48, B:C.51

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 1 residues within 4Å: Chain B: D.22 6 PLIP interactions: 1 interactions with chain B, 5 Ligand-Water interactions Metal complexes: B:D.22, H2O.1, H2O.2, H2O.2, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Q. et al., Crystal structure of the RING domain of human XIAP. To Be Published

Release Date

2023-09-27

Peptides

E3 ubiquitin-protein ligase XIAP: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase XIAP