SMTL ID : 8w6e.1 (1 other biounit)

De novo design of HBC599 binder

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x KY6: 4-[(Z)-1-cyano-2-{6-[(2-hydroxyethyl)(methyl)amino]-1-benzothiophen-2-yl}ethenyl]benzonitrile(Non-covalent)

KY6.1: 25 residues within 4Å: Chain A: I.16, I.17, V.20, D.27, L.31, D.52, V.55, M.56, S.59, L.62, L.63, A.66, Y.101, A.104, L.107, M.108, A.111, T.115, V.136, L.139, L.140, A.143, I.146, I.147, I.150 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.17, A:V.20, A:V.20, A:L.63, A:L.63, A:A.104, A:A.111, A:L.140 Hydrogen bonds: A:Y.101 Water bridges: A:I.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, M.F. et al., De novo design of HBC599 binder. To Be Published

Release Date

2024-11-27

Peptides

HBC599 in complex with wFAP1.1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HBC599 in complex with wFAP1.1

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