SMTL ID : 8w85.2 (1 other biounit)

HLA-DQ2.5-gamma2 gliadin peptide in complex with DQN0385AE01

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.77 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 4 residues within 4Å: Chain C: V.118, N.120, E.168, W.170 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:V.118 Hydrogen bonds: C:N.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okura, Y. et al., Characterizations of a neutralizing antibody broadly reactive to multiple gluten peptide:HLA-DQ2.5 complexes in the context of celiac disease. Nat Commun (2023)

Release Date

2023-11-08

Peptides

DQN0385AE01 Fab heavy chain: A
DQN0385AE01 Fab light chain: B
HLA class II histocompatibility antigen, DQ alpha 1 chain: C
MHC class II HLA-DQ-beta-1 - gamma2 gliadin peptide chimeric protein: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

DQN0385AE01 Fab heavy chain

DQN0385AE01 Fab light chain

HLA class II histocompatibility antigen, DQ alpha 1 chain

MHC class II HLA-DQ-beta-1 - gamma2 gliadin peptide chimeric protein

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