- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.49 Å
- Oligo State
- homo-24-mer
- Ligands
- 48 x FE: FE (III) ION
- 72 x CA: CALCIUM ION
CA.3: 7 residues within 4Å:- Chain A: H.174
- Chain C: H.174
- Chain U: H.174
- Chain W: H.174
- Ligands: CA.13, CA.103, CA.113
No protein-ligand interaction detected (PLIP)CA.4: 2 residues within 4Å:- Chain A: D.85
- Chain R: Q.87
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:D.85, A:D.85
CA.5: 8 residues within 4Å:- Chain A: D.132, E.135
- Chain E: D.132, E.135
- Chain I: D.132, E.135
- Ligands: CA.25, CA.45
5 PLIP interactions:2 interactions with chain E, 2 interactions with chain A, 1 interactions with chain I- Metal complexes: E:D.132, E:E.135, A:D.132, A:E.135, I:E.135
CA.8: 7 residues within 4Å:- Chain B: H.174
- Chain D: H.174
- Chain V: H.174
- Chain X: H.174
- Ligands: CA.18, CA.108, CA.118
No protein-ligand interaction detected (PLIP)CA.9: 2 residues within 4Å:- Chain B: D.85
- Chain T: Q.87
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:D.85, B:D.85
CA.10: 8 residues within 4Å:- Chain B: D.132, E.135
- Chain G: D.132, E.135
- Chain L: D.132, E.135
- Ligands: CA.35, CA.60
5 PLIP interactions:2 interactions with chain B, 2 interactions with chain G, 1 interactions with chain L- Metal complexes: B:D.132, B:E.135, G:D.132, G:E.135, L:E.135
CA.13: 7 residues within 4Å:- Chain A: H.174
- Chain C: H.174
- Chain U: H.174
- Chain W: H.174
- Ligands: CA.3, CA.103, CA.113
No protein-ligand interaction detected (PLIP)CA.14: 2 residues within 4Å:- Chain C: D.85
- Chain Q: Q.87
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:D.85, C:D.85
CA.15: 8 residues within 4Å:- Chain C: D.132, E.135
- Chain H: D.132, E.135
- Chain J: D.132, E.135
- Ligands: CA.40, CA.50
5 PLIP interactions:2 interactions with chain H, 1 interactions with chain J, 2 interactions with chain C- Metal complexes: H:D.132, H:E.135, J:E.135, C:D.132, C:E.135
CA.18: 7 residues within 4Å:- Chain B: H.174
- Chain D: H.174
- Chain V: H.174
- Chain X: H.174
- Ligands: CA.8, CA.108, CA.118
No protein-ligand interaction detected (PLIP)CA.19: 2 residues within 4Å:- Chain D: D.85
- Chain S: Q.87
2 PLIP interactions:2 interactions with chain D- Metal complexes: D:D.85, D:D.85
CA.20: 8 residues within 4Å:- Chain D: D.132, E.135
- Chain F: D.132, E.135
- Chain K: D.132, E.135
- Ligands: CA.30, CA.55
5 PLIP interactions:2 interactions with chain F, 2 interactions with chain D, 1 interactions with chain K- Metal complexes: F:D.132, F:E.135, D:D.132, D:E.135, K:E.135
CA.23: 7 residues within 4Å:- Chain E: H.174
- Chain G: H.174
- Chain R: H.174
- Chain T: H.174
- Ligands: CA.33, CA.88, CA.98
No protein-ligand interaction detected (PLIP)CA.24: 2 residues within 4Å:- Chain E: D.85
- Chain O: Q.87
2 PLIP interactions:2 interactions with chain E- Metal complexes: E:D.85, E:D.85
CA.25: 8 residues within 4Å:- Chain A: D.132, E.135
- Chain E: D.132, E.135
- Chain I: D.132, E.135
- Ligands: CA.5, CA.45
5 PLIP interactions:2 interactions with chain E, 2 interactions with chain A, 1 interactions with chain I- Metal complexes: E:D.132, E:E.135, A:D.132, A:E.135, I:E.135
CA.28: 7 residues within 4Å:- Chain F: H.174
- Chain H: H.174
- Chain Q: H.174
- Chain S: H.174
- Ligands: CA.38, CA.83, CA.93
No protein-ligand interaction detected (PLIP)CA.29: 2 residues within 4Å:- Chain F: D.85
- Chain M: Q.87
2 PLIP interactions:2 interactions with chain F- Metal complexes: F:D.85, F:D.85
CA.30: 8 residues within 4Å:- Chain D: D.132, E.135
- Chain F: D.132, E.135
- Chain K: D.132, E.135
- Ligands: CA.20, CA.55
5 PLIP interactions:2 interactions with chain F, 2 interactions with chain D, 1 interactions with chain K- Metal complexes: F:D.132, F:E.135, D:D.132, D:E.135, K:E.135
CA.33: 7 residues within 4Å:- Chain E: H.174
- Chain G: H.174
- Chain R: H.174
- Chain T: H.174
- Ligands: CA.23, CA.88, CA.98
No protein-ligand interaction detected (PLIP)CA.34: 2 residues within 4Å:- Chain G: D.85
- Chain P: Q.87
2 PLIP interactions:2 interactions with chain G- Metal complexes: G:D.85, G:D.85
CA.35: 8 residues within 4Å:- Chain B: D.132, E.135
- Chain G: D.132, E.135
- Chain L: D.132, E.135
- Ligands: CA.10, CA.60
5 PLIP interactions:2 interactions with chain B, 2 interactions with chain G, 1 interactions with chain L- Metal complexes: B:D.132, B:E.135, G:D.132, G:E.135, L:E.135
CA.38: 7 residues within 4Å:- Chain F: H.174
- Chain H: H.174
- Chain Q: H.174
- Chain S: H.174
- Ligands: CA.28, CA.83, CA.93
No protein-ligand interaction detected (PLIP)CA.39: 2 residues within 4Å:- Chain H: D.85
- Chain N: Q.87
2 PLIP interactions:2 interactions with chain H- Metal complexes: H:D.85, H:D.85
CA.40: 8 residues within 4Å:- Chain C: D.132, E.135
- Chain H: D.132, E.135
- Chain J: D.132, E.135
- Ligands: CA.15, CA.50
5 PLIP interactions:1 interactions with chain J, 2 interactions with chain H, 2 interactions with chain C- Metal complexes: J:E.135, H:D.132, H:E.135, C:D.132, C:E.135
CA.43: 7 residues within 4Å:- Chain I: H.174
- Chain K: H.174
- Chain M: H.174
- Chain O: H.174
- Ligands: CA.53, CA.63, CA.73
No protein-ligand interaction detected (PLIP)CA.44: 2 residues within 4Å:- Chain I: D.85
- Chain U: Q.87
2 PLIP interactions:2 interactions with chain I- Metal complexes: I:D.85, I:D.85
CA.45: 8 residues within 4Å:- Chain A: D.132, E.135
- Chain E: D.132, E.135
- Chain I: D.132, E.135
- Ligands: CA.5, CA.25
5 PLIP interactions:2 interactions with chain A, 2 interactions with chain E, 1 interactions with chain I- Metal complexes: A:D.132, A:E.135, E:D.132, E:E.135, I:E.135
CA.48: 7 residues within 4Å:- Chain J: H.174
- Chain L: H.174
- Chain N: H.174
- Chain P: H.174
- Ligands: CA.58, CA.68, CA.78
No protein-ligand interaction detected (PLIP)CA.49: 2 residues within 4Å:- Chain J: D.85
- Chain W: Q.87
2 PLIP interactions:2 interactions with chain J- Metal complexes: J:D.85, J:D.85
CA.50: 8 residues within 4Å:- Chain C: D.132, E.135
- Chain H: D.132, E.135
- Chain J: D.132, E.135
- Ligands: CA.15, CA.40
5 PLIP interactions:2 interactions with chain C, 2 interactions with chain H, 1 interactions with chain J- Metal complexes: C:D.132, C:E.135, H:D.132, H:E.135, J:E.135
CA.53: 7 residues within 4Å:- Chain I: H.174
- Chain K: H.174
- Chain M: H.174
- Chain O: H.174
- Ligands: CA.43, CA.63, CA.73
No protein-ligand interaction detected (PLIP)CA.54: 2 residues within 4Å:- Chain K: D.85
- Chain V: Q.87
2 PLIP interactions:2 interactions with chain K- Metal complexes: K:D.85, K:D.85
CA.55: 8 residues within 4Å:- Chain D: D.132, E.135
- Chain F: D.132, E.135
- Chain K: D.132, E.135
- Ligands: CA.20, CA.30
5 PLIP interactions:2 interactions with chain F, 2 interactions with chain D, 1 interactions with chain K- Metal complexes: F:D.132, F:E.135, D:D.132, D:E.135, K:E.135
CA.58: 7 residues within 4Å:- Chain J: H.174
- Chain L: H.174
- Chain N: H.174
- Chain P: H.174
- Ligands: CA.48, CA.68, CA.78
No protein-ligand interaction detected (PLIP)CA.59: 2 residues within 4Å:- Chain L: D.85
- Chain X: Q.87
2 PLIP interactions:2 interactions with chain L- Metal complexes: L:D.85, L:D.85
CA.60: 8 residues within 4Å:- Chain B: D.132, E.135
- Chain G: D.132, E.135
- Chain L: D.132, E.135
- Ligands: CA.10, CA.35
5 PLIP interactions:2 interactions with chain G, 2 interactions with chain B, 1 interactions with chain L- Metal complexes: G:D.132, G:E.135, B:D.132, B:E.135, L:E.135
CA.63: 7 residues within 4Å:- Chain I: H.174
- Chain K: H.174
- Chain M: H.174
- Chain O: H.174
- Ligands: CA.43, CA.53, CA.73
No protein-ligand interaction detected (PLIP)CA.64: 2 residues within 4Å:- Chain F: Q.87
- Chain M: D.85
2 PLIP interactions:2 interactions with chain M- Metal complexes: M:D.85, M:D.85
CA.65: 8 residues within 4Å:- Chain M: D.132, E.135
- Chain Q: D.132, E.135
- Chain U: D.132, E.135
- Ligands: CA.85, CA.105
5 PLIP interactions:2 interactions with chain Q, 1 interactions with chain U, 2 interactions with chain M- Metal complexes: Q:D.132, Q:E.135, U:E.135, M:D.132, M:E.135
CA.68: 7 residues within 4Å:- Chain J: H.174
- Chain L: H.174
- Chain N: H.174
- Chain P: H.174
- Ligands: CA.48, CA.58, CA.78
No protein-ligand interaction detected (PLIP)CA.69: 2 residues within 4Å:- Chain H: Q.87
- Chain N: D.85
2 PLIP interactions:2 interactions with chain N- Metal complexes: N:D.85, N:D.85
CA.70: 8 residues within 4Å:- Chain N: D.132, E.135
- Chain S: D.132, E.135
- Chain X: D.132, E.135
- Ligands: CA.95, CA.120
5 PLIP interactions:2 interactions with chain N, 1 interactions with chain X, 2 interactions with chain S- Metal complexes: N:D.132, N:E.135, X:E.135, S:D.132, S:E.135
CA.73: 7 residues within 4Å:- Chain I: H.174
- Chain K: H.174
- Chain M: H.174
- Chain O: H.174
- Ligands: CA.43, CA.53, CA.63
No protein-ligand interaction detected (PLIP)CA.74: 2 residues within 4Å:- Chain E: Q.87
- Chain O: D.85
2 PLIP interactions:2 interactions with chain O- Metal complexes: O:D.85, O:D.85
CA.75: 8 residues within 4Å:- Chain O: D.132, E.135
- Chain T: D.132, E.135
- Chain V: D.132, E.135
- Ligands: CA.100, CA.110
5 PLIP interactions:1 interactions with chain V, 2 interactions with chain T, 2 interactions with chain O- Metal complexes: V:E.135, T:D.132, T:E.135, O:D.132, O:E.135
CA.78: 7 residues within 4Å:- Chain J: H.174
- Chain L: H.174
- Chain N: H.174
- Chain P: H.174
- Ligands: CA.48, CA.58, CA.68
No protein-ligand interaction detected (PLIP)CA.79: 2 residues within 4Å:- Chain G: Q.87
- Chain P: D.85
2 PLIP interactions:2 interactions with chain P- Metal complexes: P:D.85, P:D.85
CA.80: 8 residues within 4Å:- Chain P: D.132, E.135
- Chain R: D.132, E.135
- Chain W: D.132, E.135
- Ligands: CA.90, CA.115
5 PLIP interactions:2 interactions with chain P, 2 interactions with chain R, 1 interactions with chain W- Metal complexes: P:D.132, P:E.135, R:D.132, R:E.135, W:E.135
CA.83: 7 residues within 4Å:- Chain F: H.174
- Chain H: H.174
- Chain Q: H.174
- Chain S: H.174
- Ligands: CA.28, CA.38, CA.93
No protein-ligand interaction detected (PLIP)CA.84: 2 residues within 4Å:- Chain C: Q.87
- Chain Q: D.85
2 PLIP interactions:2 interactions with chain Q- Metal complexes: Q:D.85, Q:D.85
CA.85: 8 residues within 4Å:- Chain M: D.132, E.135
- Chain Q: D.132, E.135
- Chain U: D.132, E.135
- Ligands: CA.65, CA.105
5 PLIP interactions:2 interactions with chain M, 1 interactions with chain U, 2 interactions with chain Q- Metal complexes: M:D.132, M:E.135, U:E.135, Q:D.132, Q:E.135
CA.88: 7 residues within 4Å:- Chain E: H.174
- Chain G: H.174
- Chain R: H.174
- Chain T: H.174
- Ligands: CA.23, CA.33, CA.98
No protein-ligand interaction detected (PLIP)CA.89: 2 residues within 4Å:- Chain A: Q.87
- Chain R: D.85
2 PLIP interactions:2 interactions with chain R- Metal complexes: R:D.85, R:D.85
CA.90: 8 residues within 4Å:- Chain P: D.132, E.135
- Chain R: D.132, E.135
- Chain W: D.132, E.135
- Ligands: CA.80, CA.115
5 PLIP interactions:2 interactions with chain P, 2 interactions with chain R, 1 interactions with chain W- Metal complexes: P:D.132, P:E.135, R:D.132, R:E.135, W:E.135
CA.93: 7 residues within 4Å:- Chain F: H.174
- Chain H: H.174
- Chain Q: H.174
- Chain S: H.174
- Ligands: CA.28, CA.38, CA.83
No protein-ligand interaction detected (PLIP)CA.94: 2 residues within 4Å:- Chain D: Q.87
- Chain S: D.85
2 PLIP interactions:2 interactions with chain S- Metal complexes: S:D.85, S:D.85
CA.95: 8 residues within 4Å:- Chain N: D.132, E.135
- Chain S: D.132, E.135
- Chain X: D.132, E.135
- Ligands: CA.70, CA.120
5 PLIP interactions:1 interactions with chain X, 2 interactions with chain S, 2 interactions with chain N- Metal complexes: X:E.135, S:D.132, S:E.135, N:D.132, N:E.135
CA.98: 7 residues within 4Å:- Chain E: H.174
- Chain G: H.174
- Chain R: H.174
- Chain T: H.174
- Ligands: CA.23, CA.33, CA.88
No protein-ligand interaction detected (PLIP)CA.99: 2 residues within 4Å:- Chain B: Q.87
- Chain T: D.85
2 PLIP interactions:2 interactions with chain T- Metal complexes: T:D.85, T:D.85
CA.100: 8 residues within 4Å:- Chain O: D.132, E.135
- Chain T: D.132, E.135
- Chain V: D.132, E.135
- Ligands: CA.75, CA.110
5 PLIP interactions:1 interactions with chain V, 2 interactions with chain O, 2 interactions with chain T- Metal complexes: V:E.135, O:D.132, O:E.135, T:D.132, T:E.135
CA.103: 7 residues within 4Å:- Chain A: H.174
- Chain C: H.174
- Chain U: H.174
- Chain W: H.174
- Ligands: CA.3, CA.13, CA.113
No protein-ligand interaction detected (PLIP)CA.104: 2 residues within 4Å:- Chain I: Q.87
- Chain U: D.85
2 PLIP interactions:2 interactions with chain U- Metal complexes: U:D.85, U:D.85
CA.105: 8 residues within 4Å:- Chain M: D.132, E.135
- Chain Q: D.132, E.135
- Chain U: D.132, E.135
- Ligands: CA.65, CA.85
5 PLIP interactions:2 interactions with chain Q, 1 interactions with chain U, 2 interactions with chain M- Metal complexes: Q:D.132, Q:E.135, U:E.135, M:D.132, M:E.135
CA.108: 7 residues within 4Å:- Chain B: H.174
- Chain D: H.174
- Chain V: H.174
- Chain X: H.174
- Ligands: CA.8, CA.18, CA.118
No protein-ligand interaction detected (PLIP)CA.109: 2 residues within 4Å:- Chain K: Q.87
- Chain V: D.85
2 PLIP interactions:2 interactions with chain V- Metal complexes: V:D.85, V:D.85
CA.110: 8 residues within 4Å:- Chain O: D.132, E.135
- Chain T: D.132, E.135
- Chain V: D.132, E.135
- Ligands: CA.75, CA.100
5 PLIP interactions:1 interactions with chain V, 2 interactions with chain T, 2 interactions with chain O- Metal complexes: V:E.135, T:D.132, T:E.135, O:D.132, O:E.135
CA.113: 7 residues within 4Å:- Chain A: H.174
- Chain C: H.174
- Chain U: H.174
- Chain W: H.174
- Ligands: CA.3, CA.13, CA.103
No protein-ligand interaction detected (PLIP)CA.114: 2 residues within 4Å:- Chain J: Q.87
- Chain W: D.85
2 PLIP interactions:2 interactions with chain W- Metal complexes: W:D.85, W:D.85
CA.115: 8 residues within 4Å:- Chain P: D.132, E.135
- Chain R: D.132, E.135
- Chain W: D.132, E.135
- Ligands: CA.80, CA.90
5 PLIP interactions:2 interactions with chain P, 2 interactions with chain R, 1 interactions with chain W- Metal complexes: P:D.132, P:E.135, R:D.132, R:E.135, W:E.135
CA.118: 7 residues within 4Å:- Chain B: H.174
- Chain D: H.174
- Chain V: H.174
- Chain X: H.174
- Ligands: CA.8, CA.18, CA.108
No protein-ligand interaction detected (PLIP)CA.119: 2 residues within 4Å:- Chain L: Q.87
- Chain X: D.85
2 PLIP interactions:2 interactions with chain X- Metal complexes: X:D.85, X:D.85
CA.120: 8 residues within 4Å:- Chain N: D.132, E.135
- Chain S: D.132, E.135
- Chain X: D.132, E.135
- Ligands: CA.70, CA.95
5 PLIP interactions:2 interactions with chain N, 2 interactions with chain S, 1 interactions with chain X- Metal complexes: N:D.132, N:E.135, S:D.132, S:E.135, X:E.135
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, T. et al., Human H Chain Ferritin with mutant-K86Q 2 Fe(III)/subunit loading. To Be Published
- Release Date
- 2024-09-11
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.49 Å
- Oligo State
- homo-24-mer
- Ligands
- 48 x FE: FE (III) ION
- 72 x CA: CALCIUM ION
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, T. et al., Human H Chain Ferritin with mutant-K86Q 2 Fe(III)/subunit loading. To Be Published
- Release Date
- 2024-09-11
- Peptides
- Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
A