SMTL ID : 8wfp.1 (1 other biounit)

Crystal structure of polo-like kinase(PLK1)PBD in complex with DD-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x ACE- PRO- LEU- HIS- SER- TPO- NH2: DD-1

ACE-PRO-LEU-HIS-SER-TPO-NH2.1: 12 residues within 4Å: Chain A: K.43, W.44, V.45, D.46, Y.115, L.120, L.121, R.146, R.148, F.165, H.168, K.170 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.45, A:L.121, A:F.165 Hydrogen bonds: A:W.44, A:W.44, A:D.46, A:Y.115, A:L.121, A:L.121, A:R.146, A:R.146, A:R.148, A:R.148 Water bridges: A:S.42, A:K.170, A:K.170 Salt bridges: A:H.168, A:K.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gunasekaran, P. et al., Degradation of Polo-like Kinase 1 by the Novel Poly-Arginine N-Degron Pathway PROTAC Regulates Tumor Growth in Nonsmall Cell Lung Cancer. J.Med.Chem. (2024)

Release Date

2024-09-25

Peptides

Serine/threonine-protein kinase PLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase PLK1

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