SMTL ID : 8wfq.2 (1 other biounit)

The Crystal Structure of RALDH1 from Biortus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

homo-tetramer

Ligands

4 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)

NAI.1: 27 residues within 4Å: Chain A: I.167, I.168, P.169, W.170, N.171, K.194, P.195, A.196, E.197, Q.198, G.227, P.228, G.231, A.232, F.245, T.246, G.247, S.248, E.250, V.251, I.255, C.304, E.350, Q.351, K.354, E.401, F.403 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.403, A:F.403, A:F.403 Hydrogen bonds: A:P.195, A:Q.198, A:G.247, A:S.248, A:S.248, A:Q.351 NAI.2: 27 residues within 4Å: Chain B: I.167, I.168, P.169, W.170, N.171, K.194, P.195, A.196, E.197, Q.198, G.227, P.228, G.231, A.232, F.245, T.246, G.247, S.248, V.251, L.254, I.255, G.272, C.304, E.350, Q.351, E.401, F.403 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:F.403, B:F.403 Hydrogen bonds: B:P.195, B:Q.198, B:S.248, B:S.248, B:Q.351 NAI.3: 26 residues within 4Å: Chain C: I.167, I.168, P.169, W.170, N.171, K.194, P.195, A.196, E.197, Q.198, G.227, P.228, G.231, A.232, F.245, T.246, G.247, S.248, V.251, I.255, C.304, E.350, Q.351, K.354, E.401, F.403 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:F.403, C:F.403 Hydrogen bonds: C:E.197, C:Q.198, C:S.248, C:S.248, C:Q.351 NAI.4: 28 residues within 4Å: Chain D: I.167, I.168, P.169, W.170, N.171, K.194, P.195, A.196, E.197, Q.198, G.227, P.228, G.231, A.232, F.245, T.246, G.247, S.248, V.251, I.255, E.270, L.271, G.272, C.304, E.350, Q.351, E.401, F.403 8 PLIP interactions: 8 interactions with chain D Hydrophobic interactions: D:F.403 Hydrogen bonds: D:N.171, D:P.195, D:Q.198, D:S.248, D:S.248, D:E.270, D:Q.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., The Crystal Structure of RALDH1 from Biortus. To Be Published

Release Date

2023-11-22

Peptides

Aldehyde dehydrogenase 1A1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

Aldehyde dehydrogenase 1A1

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