SMTL ID : 8wfr.1

The Crystal Structure of PCSK9 from Biortus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 4 residues within 4Å: Chain A: H.59, L.60, H.88, G.89 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.60, A:G.89 Salt bridges: A:H.59

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: T.35, F.36 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.36 EDO.4: 2 residues within 4Å: Chain A: W.44, F.122 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.44

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: L.46, T.49, D.118 Chain B: V.56, P.57, T.108, S.110 Ligands: GOL.5 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:T.49, B:V.56 Water bridges: B:N.55, B:N.55 GOL.5: 4 residues within 4Å: Chain B: E.54, N.55, V.56 Ligands: GOL.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., The Crystal Structure of PCSK9 from Biortus. To Be Published

Release Date

2023-11-22

Peptides

Proprotein convertase subtilisin/kexin type 9: A
Proprotein convertase subtilisin/kexin type 9: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proprotein convertase subtilisin/kexin type 9

Proprotein convertase subtilisin/kexin type 9

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