SMTL ID : 8wik.1

Crystal structure of human FSP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 6FA: 6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

6FA.1: 35 residues within 4Å: Chain A: G.18, G.19, G.20, F.21, G.22, D.41, M.42, K.43, N.49, V.50, L.53, Y.69, G.80, L.81, V.82, A.108, T.109, G.110, S.111, G.117, K.118, A.153, I.245, N.248, S.250, A.251, G.284, D.285, K.293, M.294, A.295, Y.296, A.298, K.355 Ligands: NAD.2 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:A.153 Hydrogen bonds: A:F.21, A:G.22, A:D.41, A:M.42, A:N.49, A:N.49, A:V.50, A:Y.69, A:V.82, A:V.82, A:G.110, A:S.111, A:K.118, A:K.118, A:D.285, A:K.293, A:A.295, A:Y.296 Water bridges: A:G.19, A:G.20, A:G.23, A:K.43, A:K.43, A:A.251, A:A.298, A:K.355, A:K.355 Salt bridges: A:K.118

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.2: 28 residues within 4Å: Chain A: V.148, G.149, G.150, G.151, S.152, A.153, E.156, I.173, H.174, S.175, Q.176, D.181, E.207, R.208, V.209, L.212, C.242, T.243, G.244, I.245, P.292, K.293, M.294, F.328, L.329, L.330, K.355 Ligands: 6FA.1 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:F.328 Hydrogen bonds: A:G.149, A:G.151, A:A.153, A:S.175, A:S.175, A:Q.176, A:R.208, A:V.209, A:V.209, A:G.244, A:K.293, A:K.293, A:L.329 Water bridges: A:S.152, A:S.152, A:G.154, A:G.154, A:E.156, A:H.174, A:D.181, A:D.181, A:C.242, A:I.245, A:L.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Feng, S. et al., The crystal structure of human ferroptosis suppressive protein 1 in complex with flavin adenine dinucleotide and nicotinamide adenine nucleotide. MedComm (2020) (2024)

Release Date

2024-05-08

Peptides

Ferroptosis suppressor protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ferroptosis suppressor protein 1