SMTL ID : 8wms.1

Crystal structure of human DPPA3 in complex with human UHRF1 PHD domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.4, C.7, C.15, C.18 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4, A:C.7, A:C.15, A:C.18 ZN.2: 4 residues within 4Å: Chain A: C.20, C.23, H.43, C.46 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.20, A:C.23, A:H.43, A:C.46 ZN.3: 4 residues within 4Å: Chain A: C.35, C.38, C.62, C.65 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.35, A:C.38, A:C.62, A:C.65 ZN.4: 2 residues within 4Å: Chain A: H.21, E.64 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.21, A:E.64, A:E.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shiraishi, N. et al., Crystal structure of human DPPA3 in complex with human UHRF1 PHD domain. To Be Published

Release Date

2024-07-31

Peptides

E3 ubiquitin-protein ligase UHRF1: A
Developmental pluripotency-associated protein 3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase UHRF1

Developmental pluripotency-associated protein 3

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