SMTL ID : 8wny.1

Cryo EM map of SLC7A10-SLC3A2 complex in the D-serine bound state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.366 No protein-ligand interaction detected (PLIP) NAG.2: 3 residues within 4Å: Chain A: E.352, N.353, N.382 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.353, A:N.382 NAG.3: 1 residues within 4Å: Chain A: N.425 No protein-ligand interaction detected (PLIP) NAG.4: 1 residues within 4Å: Chain A: N.507 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.507

1 x DSN: D-SERINE(Non-covalent)

DSN.5: 9 residues within 4Å: Chain B: N.52, I.53, I.54, G.55, G.57, F.243, A.244, S.246, Y.333 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:I.53, B:I.53, B:G.55, B:G.57, B:Y.333

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Cryo-EM structure of the human Asc-1 transporter complex. Nat Commun (2024)

Release Date

2024-05-15

Peptides

Amino acid transporter heavy chain SLC3A2: A
Asc-type amino acid transporter 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Amino acid transporter heavy chain SLC3A2

Asc-type amino acid transporter 1

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