SMTL ID : 8wq5.2 (3 other biounits)

Crystal structure of the C-terminal RRM domain of an RBP in complex with ssDNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x DG- DA- DC- DG- DC- DA: DNA (5'-D(*GP*AP*CP*GP*CP*AP*G)-3')(Non-covalent)

DG-DA-DC-DG-DC-DA.1: 18 residues within 4Å: Chain A: R.25, F.27, V.29, E.52, Y.54, L.55, V.56, S.57, K.59, V.61, Y.63, K.65, K.90, M.92, A.94, D.95, S.96, P.97 Protein-ligand interaction information (PLIP) not available

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: D.6, V.7, K.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.82 Water bridges: A:V.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X. et al., Structural basis for RNA recognition by the C-terminal RRM domain of human RBM45. J.Biol.Chem. (2024)

Release Date

2024-08-21

Peptides

RNA-binding protein 45: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RNA-binding protein 45

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