SMTL ID : 8ws1.1

Crystal structure of human NEK7 D161N mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: Y.255, P.257, L.258, R.268, V.271, N.272 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.255, A:L.258, A:L.258, A:R.268 EDO.2: 5 residues within 4Å: Chain B: Y.255, P.257, L.258, R.268, N.272 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.258, B:L.258, B:R.268 EDO.3: 7 residues within 4Å: Chain B: E.266, Q.269, L.270, M.273, Y.287, V.291 Ligands: EDO.5 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.266, B:L.270, B:Y.287 EDO.4: 8 residues within 4Å: Chain B: V.94, I.95, Y.97, M.152, H.159, L.177, G.178, D.179 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.95, B:H.159 Water bridges: B:D.179 EDO.5: 4 residues within 4Å: Chain B: V.291, R.294, M.295 Ligands: EDO.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.294

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bijpuria, S. et al., Crystal structure of human NEK7 D161N mutant. To Be Published

Release Date

2025-04-16

Peptides

Serine/threonine-protein kinase Nek7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase Nek7