SMTL ID : 8wtf.1

The Crystal Structure of IRAK4 from Biortus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 8CG: 1-{[(2S,3S,4S)-3-ethyl-4-fluoro-5-oxopyrrolidin-2-yl]methoxy}-7-methoxyisoquinoline-6-carboxamide(Non-covalent)

8CG.1: 18 residues within 4Å: Chain A: M.29, E.31, G.32, G.35, V.37, A.48, K.50, Y.99, V.100, Y.101, M.102, G.105, D.109, A.152, N.153, L.155, S.165, D.166 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.37, A:V.37, A:L.155 Hydrogen bonds: A:V.100, A:M.102, A:A.152, A:S.165 Water bridges: A:D.166

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: Q.69, K.72, R.171, A.172, S.173 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.69, A:K.72, A:A.172, A:S.173 Water bridges: A:Q.69, A:K.72 EDO.3: 3 residues within 4Å: Chain A: K.175, F.176, A.177 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.176, A:A.177 Water bridges: A:Q.178 EDO.4: 4 residues within 4Å: Chain A: K.237, H.275, E.276, K.277 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.237, A:K.237, A:E.276, A:K.277, A:K.277

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 3 residues within 4Å: Chain A: I.22, K.39, Y.41 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.41 Water bridges: A:K.39, A:K.39 Salt bridges: A:K.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., The Crystal Structure of IRAK4 from Biortus. To Be Published

Release Date

2023-11-15

Peptides

Interleukin-1 receptor-associated kinase 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Interleukin-1 receptor-associated kinase 4