SMTL ID : 8wty.1

Cryo-EM structure of noradrenaline transporter in complex with ziprasidone

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x XEF: 5-[2-[4-(1,2-benzothiazol-3-yl)piperazin-1-yl]ethyl]-6-chloranyl-1,3-dihydroindol-2-one(Non-covalent)

XEF.1: 15 residues within 4Å: Chain A: F.21, D.24, A.94, V.97, G.98, Y.101, F.266, S.267, L.268, G.269, F.272, L.275, F.278, S.368, S.369 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.21, A:F.21, A:Y.101, A:F.278 Salt bridges: A:D.24 pi-Stacking: A:F.272 Halogen bonds: A:S.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, T. et al., Transport and inhibition mechanisms of the human noradrenaline transporter. Nature (2024)

Release Date

2024-08-07

Peptides

Sodium-dependent noradrenaline transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sodium-dependent noradrenaline transporter

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