SMTL ID : 8wuy.1

Crystal Structure of TR3 LBD in complex with para-positioned 3,4,5-trisubstituted benzene derivatives

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x XBF: ~{N}-methyl-~{N}-octyl-3,4,5-tris(oxidanyl)benzamide(Non-covalent)

XBF.1: 9 residues within 4Å: Chain A: E.95, L.156, L.159, V.160, T.163, R.165, Q.178, L.205, R.213 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.156, A:V.160, A:T.163, A:L.205 Hydrogen bonds: A:E.95, A:T.163, A:R.165, A:Q.178, A:R.213 Water bridges: A:R.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, W. et al., Structure-based design and synthesis of anti-fibrotic compounds derived from para-positioned 3,4,5-trisubstituted benzene. Bioorg.Chem. (2024)

Release Date

2024-01-24

Peptides

Nuclear receptor subfamily 4immunitygroup A member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear receptor subfamily 4immunitygroup A member 1