SMTL ID : 8wz3.1

Cryo-EM structure of prefusion-stabilized RSV F (DS-Cav1 strain: A2) in complex with nAb 5B11

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-3-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain C: N.471, E.472, N.475 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.471, C:E.472, C:N.475 NAG.2: 3 residues within 4Å: Chain F: N.471, E.472, N.475 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:N.471, F:E.472, F:N.475 NAG.3: 3 residues within 4Å: Chain I: N.471, E.472, N.475 3 PLIP interactions: 3 interactions with chain I Hydrogen bonds: I:N.471, I:E.472, I:N.475

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, Y. et al., A potent broad-spectrum neutralizing antibody targeting a conserved region of the prefusion RSV F protein. Nat Commun (2024)

Release Date

2024-11-13

Peptides

5B11 Fab Heavy Chain: ADG
5B11 Fab Light Chain: BEH
RSV Fusion glycoprotein: CFI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

D
E

G
G

B
F

E
H

H
K

C
A

F
B

I
C

5B11 Fab Heavy Chain

5B11 Fab Light Chain

RSV Fusion glycoprotein

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