SMTL ID : 8x0e.1

Human FL Metabotropic glutamate receptor 5, mGlu5-5M with agonist and PAM, W785A mutant

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.40 Å

Oligo State

homo-dimer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: R.188, N.190 No protein-ligand interaction detected (PLIP) NAG.3: 2 residues within 4Å: Chain B: R.188, N.190 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.190

2 x QUS: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID(Non-covalent)

QUS.2: 13 residues within 4Å: Chain A: Y.44, W.80, S.132, S.153, A.154, T.155, Y.203, E.259, G.260, D.285, G.286, R.290, K.376 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.44, A:S.132, A:S.153, A:T.155, A:G.260, A:D.285, A:R.290 pi-Stacking: A:W.80 QUS.4: 14 residues within 4Å: Chain B: Y.44, W.80, G.130, S.132, S.153, A.154, T.155, Y.203, E.259, G.260, D.285, G.286, R.290, K.376 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:Y.44, B:Y.44, B:S.132, B:S.153, B:T.155, B:T.155, B:T.155, B:G.260, B:D.285, B:R.290 pi-Stacking: B:W.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vinothkumar, K.R. et al., Conformational diversity in class C GPCR positive allosteric modulation. To Be Published

Release Date

2024-11-06

Peptides

Metabotropic glutamate receptor 5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Metabotropic glutamate receptor 5