SMTL ID : 8x5m.1

The Crystal Structure of JNK1 from Biortus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x Y4O: 3-[4-(dimethylamino)butanoylamino]-~{N}-[3-methyl-4-[(4-pyridin-3-ylpyrimidin-2-yl)amino]phenyl]benzamide(Covalent)

Y4O.1: 17 residues within 4Å: Chain A: I.31, G.32, V.39, A.52, M.107, E.108, L.109, M.110, D.111, N.113, C.115, Q.116, P.153, V.157, L.167, Y.190, V.222 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.31, A:V.39, A:V.39, A:A.52, A:V.157, A:L.167, A:L.167 Hydrogen bonds: A:M.110, A:M.110, A:N.113 Water bridges: A:Q.116, A:Q.116, A:Q.119, A:Y.190 Salt bridges: A:E.216

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: Y.10, K.23, Q.26 No protein-ligand interaction detected (PLIP) GOL.3: 3 residues within 4Å: Chain A: E.125, R.126, Y.129 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.125

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain A: Y.70, Q.340, L.341, D.342, R.344, H.346 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.342, A:R.344 Water bridges: A:R.344

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., The Crystal Structure of JNK1 from Biortus. To Be Published

Release Date

2023-12-27

Peptides

Mitogen-activated protein kinase 8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 8