SMTL ID : 8x62.1

crystal structure of human Mcl-1 kinase domain in complex with RM1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

1 x YO0: 1-[7-[1,5-dimethyl-3-(phenoxymethyl)pyrazol-4-yl]-3-(3-naphthalen-1-yloxypropyl)-1~{H}-indol-2-yl]-2,2-bis(oxidanyl)ethanone(Covalent)

YO0.1: 16 residues within 4Å: Chain A: H.54, A.57, F.58, G.60, M.61, K.64, L.65, M.80, V.83, F.84, R.93, T.96, L.97, F.100, G.101, I.124 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:A.57, A:F.58, A:K.64, A:L.65, A:M.80, A:V.83, A:F.84, A:T.96, A:L.97, A:F.100, A:F.100, A:I.124 Hydrogen bonds: A:V.83 pi-Stacking: A:F.100, A:F.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z.M. et al., crystal structure of human Mcl-1 kinase domain in complex with RM1. To Be Published

Release Date

2025-05-21

Peptides

Induced myeloid leukemia cell differentiation protein Mcl-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Induced myeloid leukemia cell differentiation protein Mcl-1