SMTL ID : 8xag.1 (1 other biounit)

Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with histone H3.3K27me3 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x ALA- ARG- M3L- SER- ALA- PRO- THR- THR: histone H3.3K27me3 peptide(Non-covalent)

ALA-ARG-M3L-SER-ALA-PRO-THR-THR.1: 13 residues within 4Å: Chain A: K.6, L.7, D.8, E.9, G.10, F.11, Y.12, W.33, W.36, A.40, T.42, E.44, N.48 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.12, A:W.33, A:W.33 Hydrogen bonds: A:K.6, A:D.8, A:D.8, A:Y.12, A:E.44, A:N.48, A:N.48 Water bridges: A:W.43, A:E.44, A:L.49 Salt bridges: A:D.8 pi-Cation interactions: A:F.11, A:Y.12, A:W.33, A:W.36, A:W.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with histone H3.3K27me3 peptide. To Be Published

Release Date

2024-12-04

Peptides

Chromo domain-containing protein LHP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Chromo domain-containing protein LHP1

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