SMTL ID : 8xb2.1

Structure of radafaxine-bound state of the human Norepinephrine Transporter

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: P.807, N.808 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.807

1 x YNT: (2~{S},3~{S})-2-(3-chlorophenyl)-3,5,5-trimethyl-morpholin-2-ol

YNT.2: 16 residues within 4Å: Chain A: D.699, A.701, A.769, V.772, G.773, Y.776, F.943, F.944, S.945, L.946, G.947, F.950, V.952, S.1046, S.1047, G.1050 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.769, A:Y.776, A:F.944, A:F.950, A:F.950 Hydrogen bonds: A:D.699, A:S.1046

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ji, W. et al., Substrate binding and inhibition mechanism of norepinephrine transporter. Nature (2024)

Release Date

2024-07-10

Peptides

GFP-MBP-solute carrier family 6 member 2,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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GFP-MBP-solute carrier family 6 member 2,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter

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