SMTL ID : 8xbg.1

Human GPR34 -Gi complex bound to S3E-LysoPS, receptor focused

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.43 Å

Oligo State

monomer

Ligands

1 x KW0: (2~{S})-2-azanyl-3-[[(2~{R})-1-ethoxy-3-[(~{Z})-octadec-9-enoyl]oxy-propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-propanoic acid

KW0.1: 19 residues within 4Å: Chain A: R.119, K.137, G.140, T.141, Y.144, M.145, A.191, M.198, T.202, F.214, H.215, K.219, E.225, F.228, N.229, L.232, R.295, Y.298, N.318 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.144, A:Y.144, A:M.145, A:A.191, A:E.225, A:F.228, A:L.232 Hydrogen bonds: A:R.119, A:F.214, A:N.229, A:Y.298, A:N.318 Salt bridges: A:K.219, A:R.295, A:R.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Izume, T. et al., Structural basis for lysophosphatidylserine recognition by GPR34. Nat Commun (2024)

Release Date

2024-05-15

Peptides

Probable G-protein coupled receptor 34: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Probable G-protein coupled receptor 34

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