SMTL ID : 8xcd.1

Macaca fascicularis NTCP in complex with YN69083 Fab

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

2 x TCH: TAUROCHOLIC ACID(Non-covalent)

TCH.1: 12 residues within 4Å: Chain A: D.26, L.29, V.204, T.205, S.208, N.211, Q.266, F.285, L.289, M.292, L.296 Ligands: TCH.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.204, A:T.205, A:L.289, A:M.292 Hydrogen bonds: A:N.211, A:Q.266 TCH.2: 13 residues within 4Å: Chain A: L.33, M.36, L.37, N.105, L.106, R.160, S.164, I.197, S.201, N.264, Q.266, L.296 Ligands: TCH.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.33, A:L.37, A:L.106, A:L.106, A:I.197 Hydrogen bonds: A:N.105, A:R.160, A:S.164, A:S.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shionoya, K. et al., Structural basis for hepatitis B virus restriction by a viral receptor homologue. Nat Commun (2024)

Release Date

2024-11-13

Peptides

Solute carrier family 10 member a1: A
YN69083 Fab Heavy chain: B
YN69083 Fab Light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Membrane

We predict this structure to be a membrane protein.
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Solute carrier family 10 member a1

YN69083 Fab Heavy chain

YN69083 Fab Light chain

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