SMTL ID : 8xpu.1

Overall structure of the LAT1-4F2hc bound with JPH203

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: N.396, S.397 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 1 residues within 4Å: Chain A: N.380 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 2 residues within 4Å: Chain A: N.521, M.522 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 1 residues within 4Å: Chain A: N.439 No protein-ligand interaction detected (PLIP)

1 x VRW: (2~{S})-2-azanyl-3-[4-[(5-azanyl-2-phenyl-1,3-benzoxazol-7-yl)methoxy]-3,5-bis(chloranyl)phenyl]propanoic acid(Non-covalent)

VRW.5: 18 residues within 4Å: Chain B: I.83, I.84, G.85, S.86, G.87, I.160, S.164, I.167, V.168, F.272, A.273, Y.274, G.275, Y.279, Y.309, I.417, F.420, N.424 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:I.167, B:V.168, B:F.272, B:I.417, B:N.424 Hydrogen bonds: B:G.85, B:S.86, B:G.87, B:F.272, B:Y.309, B:F.420, B:N.424, B:N.424 Halogen bonds: B:Y.279

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, Z. et al., Structural basis for the inhibition mechanism of LAT1-4F2hc complex by JPH203. Cell Discov (2024)

Release Date

2024-07-17

Peptides

Isoform 5 of Amino acid transporter heavy chain SLC3A2: A
Large neutral amino acids transporter small subunit 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Isoform 5 of Amino acid transporter heavy chain SLC3A2

Large neutral amino acids transporter small subunit 1

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