SMTL ID : 8xq1.1

Crystal structure of spleen tyrosine kinase(SYK) in complex with SKI-G-1673

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x 01: cyclopropyl-[5-[[4-[4-[[(3~{R},4~{S})-3-methoxy-4-oxidanyl-pyrrolidin-1-yl]methyl]-3-methyl-pyrazol-1-yl]pyrimidin-2-yl]amino]-1-methyl-pyrrolo[2,3-b]pyridin-3-yl]methanone

01.1: 17 residues within 4Å: Chain A: L.22, G.23, S.24, F.27, V.30, A.45, E.65, M.93, E.94, M.95, A.96, G.99, P.100, R.143, N.144, L.146, D.157 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.27, A:A.45, A:L.146 Hydrogen bonds: A:A.96, A:A.96 Salt bridges: A:D.157 01.2: 15 residues within 4Å: Chain B: L.22, G.23, V.30, A.45, E.65, M.93, E.94, M.95, A.96, G.99, P.100, R.143, N.144, L.146, D.157 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:A.45, B:L.146 Hydrogen bonds: B:A.96, B:A.96 Salt bridges: B:D.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, B.I., Crystal structure of spleen tyrosine kinase(SYK) in complex with SKI-G-1673. To Be Published

Release Date

2025-01-15

Peptides

Tyrosine-protein kinase SYK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosine-protein kinase SYK

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