SMTL ID : 8xsb.1

Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with Indirubin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.06 Å

Oligo State

hetero-1-1-mer

Ligands

1 x JY6: (3~{Z})-3-(3-oxidanylidene-1~{H}-indol-2-ylidene)-1~{H}-indol-2-one(Non-covalent)

JY6.1: 16 residues within 4Å: Chain B: T.263, H.265, F.269, L.282, G.295, Y.296, F.298, I.299, C.307, H.311, I.323, F.325, L.327, S.339, A.355, Q.357 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:L.282, B:F.298, B:I.299, B:H.311, B:I.323, B:F.325, B:L.327, B:L.327 Hydrogen bonds: B:S.339, B:Q.357, B:Q.357 pi-Stacking: B:H.265, B:H.265, B:F.269, B:F.269, B:F.325

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Diao, X. et al., Structural mechanism of the ligand-activated heterodimeric AHR-ARNT complex. To be published

Release Date

2025-01-15

Peptides

Aryl hydrocarbon receptor nuclear translocator: A
Aryl hydrocarbon receptor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Aryl hydrocarbon receptor nuclear translocator

Aryl hydrocarbon receptor

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