SMTL ID : 8xxe.1 (1 other biounit)

TtCS-intermediate complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

homo-dimer

Ligands

2 x OAA: OXALOACETATE ION(Non-covalent)

OAA.1: 9 residues within 4Å: Chain A: H.238, N.242, H.274, H.320, R.329, F.397, R.401 Chain B: R.421 Ligands: COA.2 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.329, A:R.329 Water bridges: A:H.274 Salt bridges: A:H.238, A:H.238, A:H.274, A:H.320, A:R.329, A:R.401, B:R.421 OAA.3: 6 residues within 4Å: Chain A: R.421 Chain B: H.238, N.242, H.274, R.401 Ligands: COA.4 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:N.242 Water bridges: B:R.329, B:R.401 Salt bridges: B:H.238, B:H.238, B:H.274, B:R.401, A:R.421

2 x COA: COENZYME A(Non-covalent)

COA.2: 18 residues within 4Å: Chain A: A.277, L.309, Q.313, V.314, I.315, P.316, G.317, Y.318, G.319, H.320, A.321, L.361, K.366, A.367, K.368, N.373, D.375 Ligands: OAA.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:I.315, A:G.317, A:Y.318, A:Y.318, A:Y.318, A:K.366, A:K.368, A:N.373 COA.4: 9 residues within 4Å: Chain A: R.22, R.165, P.418, R.421 Chain B: R.43, G.319, H.320, A.321 Ligands: OAA.3 11 PLIP interactions: 3 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:A.321 Hydrogen bonds: B:A.321, A:R.421, A:R.421 Salt bridges: B:R.43, A:R.22, A:R.421 Water bridges: A:R.165, A:R.165, A:I.419, A:I.419

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, L. et al., TtCS-intermediate complex. To Be Published

Release Date

2025-01-22

Peptides

Citrate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Citrate synthase

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