SMTL ID : 8y1x.1

Cryo-EM structure of the aspartate:alanine antiporter AspT WT

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x ASP: ASPARTIC ACID(Non-covalent)

ASP.1: 10 residues within 4Å: Chain A: F.69, M.70, T.130, Q.131, S.132, Y.167, L.431, T.496, S.498, Y.524 7 PLIP interactions: 6 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:L.431 Hydrogen bonds: A:T.130, A:S.132, A:S.498, A:Y.524, A:Y.524, D.1 ASP.2: 10 residues within 4Å: Chain B: F.69, M.70, T.130, Q.131, S.132, Y.167, L.431, T.496, S.498, Y.524 7 PLIP interactions: 6 interactions with chain B, 1 Ligand-Ligand interactions Hydrophobic interactions: B:L.431 Hydrogen bonds: B:T.130, B:S.132, B:S.498, B:Y.524, B:Y.524, D.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nanatani, K. et al., Cryo-EM structure and molecular mechanism of the aspartate:alanine antiporter AspT from Tetragenococcus halophilus. To Be Published

Release Date

2025-01-29

Peptides

Aspartate/alanine antiporter: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Aspartate/alanine antiporter