SMTL ID : 8y20.1

Crystal structure of the Mcl-1 in complex with A-1210477

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 16 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, R.345 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:E.154, A:Y.156, A:R.345

1 x 01: A-1210477

01.2: 22 residues within 4Å: Chain A: V.413, V.417, H.421, A.424, F.425, M.428, L.432, L.443, V.446, M.447, V.450, F.451, G.459, R.460, V.462, T.463, L.464, F.467, G.468, L.487, I.491, F.516 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:F.425, A:F.425, A:M.428, A:L.432, A:L.443, A:V.450, A:T.463, A:T.463, A:F.467, A:F.467, A:F.467, A:I.491, A:I.491 Hydrogen bonds: A:V.450 Salt bridges: A:R.460 pi-Stacking: A:H.421, A:F.467, A:F.467

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, H. et al., Deciphering molecular specificity in MCL-1/BAK interaction and its implications for designing potent MCL-1 inhibitors. Cell Death Differ. (2025)

Release Date

2025-01-29

Peptides

Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1

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