SMTL ID : 8y2f.1

Cryo-EM structure of human dopamine transporter in complex with GBR12909

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x 01: 1-[2-[bis(4-fluorophenyl)methoxy]ethyl]-4-(3-phenylpropyl)piperazine

01.1: 14 residues within 4Å: Chain A: S.7, F.11, D.14, S.84, V.87, G.88, Y.91, F.255, F.261, V.263, F.267, D.356, S.357, G.361 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.11, A:V.87, A:F.261, A:V.263, A:F.267, A:F.267 pi-Stacking: A:F.11, A:Y.91

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.116 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.116 NAG.3: 1 residues within 4Å: Chain A: N.123 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Dopamine reuptake and inhibitory mechanisms in human dopamine transporter. Nature (2024)

Release Date

2024-08-14

Peptides

Sodium-dependent dopamine transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sodium-dependent dopamine transporter

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