SMTL ID : 8y4a.1

BA.2.86 S-trimer in complex with Nab XG2v046

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-2-2-mer
Ligands
9 x NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(8-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
39 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhu, Q. et al., Enhancing RBD exposure and S1 shedding by an extremely conserved SARS-CoV-2 NTD epitope. Signal Transduct Target Ther (2024)
Release Date
2024-09-11
Peptides
Spike glycoprotein: ABC
XG2v046 Heavy chain: DF
XG2v046 Light chain: EG
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
C
C
A
D
H
F
D
E
L
G
E

Spike glycoprotein

Toggle Identical (ABC)

XG2v046 Heavy chain

Toggle Identical (DF)

XG2v046 Light chain

Toggle Identical (EG)

Related Entries With Identical Sequence

8y4c.1