SMTL ID : 8y5b.1

Crystal structure of TRIM21 PRYSPRY (D355A) in complex with (R)-hydroxyl-acepromazine.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x 01: (1~{R})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol

01.1: 16 residues within 4Å: Chain A: Y.45, M.47, A.70, W.71, A.72, F.86, L.87, L.88, W.98, L.99, W.100, Q.112, S.164, P.165, G.166, F.167 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.45, A:A.72, A:L.87, A:L.88, A:W.98 Hydrogen bonds: A:F.86, A:L.88 pi-Stacking: A:F.167 pi-Cation interactions: A:W.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, P. et al., Selective degradation of multimeric proteins by TRIM21-based molecular glue and PROTAC degraders. Cell (2024)

Release Date

2024-10-09

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase TRIM21

Related Entries With Identical Sequence