SMTL ID : 8y9c.1

De novo design mini-binder in complex with TcdB4

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: D.547, H.654, C.699, H.758 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.547, A:H.654, A:C.699, A:H.758

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lv, X. et al., De novo design of mini-protein binders broadly neutralizing Clostridioides difficile toxin B variants. Nat Commun (2024)

Release Date

2024-08-28

Peptides

Toxin B: A
De novo design Minibinder: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Toxin B

De novo design Minibinder

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