SMTL ID : 8yav.1

Crystal structure of glucose 1-dehydrogenase from Limosilactobacillus fermentum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-tetramer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: Q.247 Chain D: Q.247 6 PLIP interactions: 1 interactions with chain A, 1 interactions with chain D, 4 Ligand-Water interactions Metal complexes: A:Q.247, D:Q.247, H2O.2, H2O.3, H2O.4, H2O.18 MG.2: 2 residues within 4Å: Chain B: Q.247 Chain C: Q.247 6 PLIP interactions: 1 interactions with chain C, 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: C:Q.247, B:Q.247, H2O.8, H2O.8, H2O.10, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Q. et al., Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir. Adv.Synth.Catal. (2024)

Release Date

2024-10-30

Peptides

SDR family oxidoreductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

SDR family oxidoreductase

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